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- From: "Roberta Bardini" <address@concealed>
- To: "address@concealed" <address@concealed>
- Subject: [PN-world] Nets-Within-Nets for Systems Biology
- Date: Thu, 8 Aug 2024 16:38:19 +0000
- Accept-language: en-US
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Dear Petri Nets Community,
this is to share a collection of our research items applying the Nets-Within-Nets formalism to systems biology. I really hope this could be interesting for the Petri Nets research community.
Our papers:
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Bardini, R., Benso, A., Politano, G., & Di Carlo, S. (2021). Nets-within-nets for modeling emergent patterns in ontogenetic processes. Computational and Structural Biotechnology Journal, 19, 5701-5721.
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Bardini, R., Benso, A., Di Carlo, S., Politano, G., & Savino, A. (2016). Using nets-within-nets for modeling differentiating cells in the epigenetic landscape. In Bioinformatics and Biomedical Engineering: 4th International Conference, IWBBIO 2016, Granada, Spain, April 20-22, 2016, Proceedings 4 (pp. 315-321). Springer International Publishing.
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Bardini, R., Di Carlo, S., Politano, G. et al. Modeling antibiotic resistance in the microbiota using multi-level Petri Nets. BMC Syst Biol 12 (Suppl 6), 108 (2018). https://doi.org/10.1186/s12918-018-0627-1
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Bardini, R., Politano, G., Benso, A., & Di Carlo, S. (2017, November). Using multi-level petri nets models to simulate microbiota resistance to antibiotics. In 2017 IEEE international conference on bioinformatics and biomedicine (BIBM) (pp. 128-133). IEEE.
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Bardini, R. (2019). A diversity-aware computational framework for systems biology (Doctoral dissertation, Polytechnic University of Turin, Italy) https://hdl.handle.net/11583/2752792
Please contact address@concealed if you have any questions or you want to discuss our research!
Sincerely,
Roberta Bardini
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- [PN-world] Nets-Within-Nets for Systems Biology, Roberta Bardini, 08/08/2024
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